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https://github.com/nanoporetech/modkit
A bioinformatics tool for working with modified bases
https://github.com/nanoporetech/modkit
methylation modified-bases nanopore
Last synced: about 2 months ago
JSON representation
A bioinformatics tool for working with modified bases
- Host: GitHub
- URL: https://github.com/nanoporetech/modkit
- Owner: nanoporetech
- License: other
- Created: 2023-03-03T16:28:51.000Z (over 1 year ago)
- Default Branch: master
- Last Pushed: 2024-05-02T21:02:45.000Z (2 months ago)
- Last Synced: 2024-05-09T15:34:28.600Z (about 2 months ago)
- Topics: methylation, modified-bases, nanopore
- Language: Rust
- Homepage: https://nanoporetech.com/
- Size: 196 MB
- Stars: 105
- Watchers: 13
- Forks: 4
- Open Issues: 51
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Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
Lists
- awesome-nanopore - modkit - [Rust] - Extract modified base calls from dorado BAM output to bedMethyl format, also calculate DMRs (Software packages / DNA modification analysis)