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https://github.com/novoalab/nanoRMS
Prediction of RNA modifications and their stoichiometry from per-read features: current intensity, dwell time and trace (Begik*, Lucas* et al., Nature Biotech 2021)
https://github.com/novoalab/nanoRMS
predict-rna-modifications rna-modification-stoichiometry tombo-resquiggling
Last synced: about 2 months ago
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Prediction of RNA modifications and their stoichiometry from per-read features: current intensity, dwell time and trace (Begik*, Lucas* et al., Nature Biotech 2021)
- Host: GitHub
- URL: https://github.com/novoalab/nanoRMS
- Owner: novoalab
- Created: 2020-07-26T22:08:10.000Z (almost 4 years ago)
- Default Branch: master
- Last Pushed: 2022-12-21T12:05:54.000Z (over 1 year ago)
- Last Synced: 2023-08-23T15:14:33.119Z (10 months ago)
- Topics: predict-rna-modifications, rna-modification-stoichiometry, tombo-resquiggling
- Language: Jupyter Notebook
- Homepage:
- Size: 115 MB
- Stars: 19
- Watchers: 6
- Forks: 10
- Open Issues: 1
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Metadata Files:
- Readme: README.md
Lists
- awesome-nanopore - nanoRMS - [Python] - [Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing](https://www.nature.com/articles/s41587-021-00915-6?proof=t%3B). (Software packages / RNA modification analysis)