https://github.com/AdaptInfer/clehrity

Automatically finding surprises in EHRs
https://github.com/AdaptInfer/clehrity

Last synced: 5 months ago
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Automatically finding surprises in EHRs

• Host: GitHub
• URL: https://github.com/AdaptInfer/clehrity
• Owner: AdaptInfer
• License: mit
• Created: 2023-10-01T18:28:54.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2024-08-21T04:02:52.000Z (over 1 year ago)
• Last Synced: 2025-09-13T23:24:43.982Z (5 months ago)
• Language: Python
• Homepage:
• Size: 588 KB
• Stars: 8
• Watchers: 2
• Forks: 0
• Open Issues: 19
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: CODE_OF_CONDUCT.md

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README

          


[![PyPI](https://img.shields.io/pypi/v/clehrity.svg)][pypi_]

[![Status](https://img.shields.io/pypi/status/clehrity.svg)][status]

[![Python Version](https://img.shields.io/pypi/pyversions/clehrity)][python version]

[![License](https://img.shields.io/pypi/l/clehrity)][license]

[![Read the documentation at https://clehrity.readthedocs.io/](https://img.shields.io/readthedocs/clehrity/latest.svg?label=Read%20the%20Docs)][read the docs]

[![Tests](https://github.com/blengerich/clehrity/workflows/Tests/badge.svg)][tests]

[![Codecov](https://codecov.io/gh/blengerich/clehrity/branch/main/graph/badge.svg)][codecov]

[![pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit&logoColor=white)][pre-commit]

[![Black](https://img.shields.io/badge/code%20style-black-000000.svg)][black]

[pypi_]: https://pypi.org/project/clehrity/

[status]: https://pypi.org/project/clehrity/

[python version]: https://pypi.org/project/clehrity

[read the docs]: https://clehrity.readthedocs.io/

[tests]: https://github.com/blengerich/clehrity/actions?workflow=Tests

[codecov]: https://app.codecov.io/gh/blengerich/clehrity

[pre-commit]: https://github.com/pre-commit/pre-commit

[black]: https://github.com/psf/black

## Features

EHR deconfounding via:

- Statistical tests of discontinuity / non-monotoncities

- Integration with LLMs to find surprising / counter-causal effects

## Requirements

- Python >=3.9

## Installation

You can install _Clehrity_ via [pip] from [PyPI]:

```console

$ pip install clehrity

```

## Usage

Please see the [Command-line Reference] for details.

## Contributing

Contributions are very welcome.

To learn more, see the [Contributor Guide].

## License

Distributed under the terms of the [MIT license][license],

_Clehrity_ is free and open source software.

## Issues

If you encounter any problems,

please [file an issue] along with a detailed description.

## Credits

This project was generated from [@cjolowicz]'s [Hypermodern Python Cookiecutter] template.

[@cjolowicz]: https://github.com/cjolowicz

[pypi]: https://pypi.org/

[hypermodern python cookiecutter]: https://github.com/cjolowicz/cookiecutter-hypermodern-python

[file an issue]: https://github.com/blengerich/clehrity/issues

[pip]: https://pip.pypa.io/

[license]: https://github.com/blengerich/clehrity/blob/main/LICENSE

[contributor guide]: https://github.com/blengerich/clehrity/blob/main/CONTRIBUTING.md

[command-line reference]: https://clehrity.readthedocs.io/en/latest/usage.html