https://github.com/CAVEconnectome/CAVEclient

This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.
https://github.com/CAVEconnectome/CAVEclient

connectomics

Last synced: 6 months ago
JSON representation

This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.

• Host: GitHub
• URL: https://github.com/CAVEconnectome/CAVEclient
• Owner: CAVEconnectome
• License: mit
• Created: 2018-10-10T14:47:22.000Z (almost 8 years ago)
• Default Branch: master
• Last Pushed: 2025-12-05T22:03:44.000Z (8 months ago)
• Last Synced: 2026-01-04T16:47:18.942Z (7 months ago)
• Topics: connectomics
• Language: Python
• Homepage: https://caveconnectome.github.io/CAVEclient/
• Size: 15.4 MB
• Stars: 35
• Watchers: 23
• Forks: 13
• Open Issues: 40
• Metadata Files:
  • Readme: README.md
  • Contributing: docs/contributing.md
  • License: LICENSE

Awesome Lists containing this project

README

          
# CAVEclient

![PyPI - Version](https://img.shields.io/pypi/v/CAVEclient)

[![build status](https://github.com/CAVEconnectome/CAVEclient/actions/workflows/daily.yml/badge.svg)](https://github.com/CAVEconnectome/CAVEclient/actions/workflows/daily.yml) [![Downloads](https://static.pepy.tech/badge/caveclient)](https://pepy.tech/project/caveclient)

[![codecov](https://codecov.io/gh/CAVEconnectome/CAVEclient/graph/badge.svg?token=KVI1AG6B8A)](https://codecov.io/gh/CAVEconnectome/CAVEclient)

CAVE is short for Connectome Annotation Versioning Engine. CAVE is a set of microservices

that provide a framework for storing and versioning connectomics data and large sets of

dynamic annotations, metadata, and segmentations. This repository supplies client-side

code to easily interact with the microservices in CAVE.

A full description of the Connectome Annotation Versioning Engine can be found [in this paper](https://www.biorxiv.org/content/10.1101/2023.07.26.550598v1).

## Installation

`CAVEclient` can be installed from PyPI:

```bash

pip install caveclient

```

To add optional dependencies (currently for interfacing with the segmentation, imagery,

and some skeleton formats via cloud-volume), you can install with the following:

```bash

pip install caveclient[cv]

```

## Python version support

Currently we are officially supporting and testing against Python 3.9, 3.10, 3.11 and 3.12.

## Documentation

You can find full documentation at [caveconnectome.github.io/CAVEclient](https://caveconnectome.github.io/CAVEclient).

## Issues

We welcome bug reports and questions. Please post an informative issue on the [GitHub issue tracker](https://github.com/CAVEconnectome/CAVEclient/issues).

## Development

To view information about developing CAVEclient, see our [contributing guide](https://caveconnectome.github.io/CAVEclient/contributing).