https://github.com/EIT-team/EITPipelineExample

How to go from Geometry -> Mesh -> Forward -> Inverse -> EIT image
https://github.com/EIT-team/EITPipelineExample

electrical-impedance-tomography

Last synced: 8 days ago
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How to go from Geometry -> Mesh -> Forward -> Inverse -> EIT image

• Host: GitHub
• URL: https://github.com/EIT-team/EITPipelineExample
• Owner: EIT-team
• License: gpl-3.0
• Created: 2019-05-07T13:08:58.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2020-02-10T11:25:30.000Z (over 4 years ago)
• Last Synced: 2024-07-31T23:44:33.927Z (3 months ago)
• Topics: electrical-impedance-tomography
• Language: MATLAB
• Size: 5.25 MB
• Stars: 5
• Watchers: 10
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

• awesome-eit - EITPipelineExample - > Mesh -> Forward -> Inverse -> EIT image. From **EIT-team**. (EIT simulation libraries)

README

        
# Making EIT images

How to go from Geometry -> Mesh -> Forward -> Inverse -> EIT image

To make an image you need to install and make visible to Matlab:

0. [iso2mesh](https://github.com/fangq/iso2mesh) - add folder to matlab path. This contains useful tools for handling meshes in Matlab

0. [Mesher](https://github.com/EIT-team/Mesher) - add MATLAB folder to path. If you are using WSL to run the linux software on Windows, its better to have this in a windows folder that in ubuntu looks like `/mnt/c/Users/User/Mesher`. This creates the FEM models from segmentations

0. [Supersolver](https://github.com/EIT-team/SuperSolver) - add src directory. This runs the forward model and creates the jacobian

0. [Reconstruction](https://github.com/EIT-team/Reconstruction) - add src/matlab. This inverts the jacobian and creates images

0. [paraview](https://www.paraview.org/download/) - views the output vtk files

Each directory has examples, some of which is repeated here, so if something is not working then check within the specific directory for more info.