https://github.com/PHI-base/phipo

Pathogen-Host Interaction Phenotype Ontology
https://github.com/PHI-base/phipo

obofoundry ontology

Last synced: about 1 month ago
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Pathogen-Host Interaction Phenotype Ontology

• Host: GitHub
• URL: https://github.com/PHI-base/phipo
• Owner: PHI-base
• License: other
• Created: 2017-11-28T10:23:13.000Z (over 7 years ago)
• Default Branch: master
• Last Pushed: 2024-10-16T12:09:59.000Z (6 months ago)
• Last Synced: 2025-03-06T03:25:50.240Z (about 2 months ago)
• Topics: obofoundry, ontology
• Language: Makefile
• Homepage:
• Size: 25.7 MB
• Stars: 5
• Watchers: 4
• Forks: 5
• Open Issues: 29
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE

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# Pathogen-Host Interaction Phenotype Ontology

PHIPO is a formal ontology of species-neutral phenotypes observed in pathogen-host interactions.

PHIPO is being developed to support the comprehensive and detailed representation of phenotypes in PHI-base, the multi-species Pathogen-Host Interactions database available online at http://www.phi-base.org. PHIPO is pre-composed and logically defined.

## Versions

### Stable release versions

The latest version of the ontology can always be found at:

* http://purl.obolibrary.org/obo/phipo.owl

* http://purl.obolibrary.org/obo/phipo.obo

### Editors' version

Editors of this ontology should use the edit version, [src/ontology/phipo-edit.owl](src/ontology/phipo-edit.owl)

## Contact

Please use this repository's [issue tracker](https://github.com/PHI-base/phipo/issues) to request new terms and classes, or to report errors or specific concerns related to the ontology.

## Acknowledgements

This ontology repository was created using the [Ontology Development Kit](https://github.com/INCATools/ontology-development-kit).

## Publications

Alayne Cuzick, James Seager, Valerie Wood, Martin Urban, Kim Rutherford, and Kim E. Hammond-Kosack (2023) **A framework for community curation of interspecies interaction literature.** eLife2023;12:e84658 DOI: https://doi.org/10.7554/eLife.84658