https://github.com/PhDMeiwp/ggtrendline

ggtrendline: An R Package for Adding Trendline and Confidence Interval to 'ggplot'.
https://github.com/PhDMeiwp/ggtrendline

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ggtrendline: An R Package for Adding Trendline and Confidence Interval to 'ggplot'.

• Host: GitHub
• URL: https://github.com/PhDMeiwp/ggtrendline
• Owner: PhDMeiwp
• Created: 2022-04-13T13:51:22.000Z (over 2 years ago)
• Default Branch: master
• Last Pushed: 2022-05-04T11:55:38.000Z (over 2 years ago)
• Last Synced: 2023-11-20T14:43:16.519Z (10 months ago)
• Language: R
• Homepage: https://CRAN.R-project.org/package=ggtrendline
• Size: 99.6 KB
• Stars: 21
• Watchers: 1
• Forks: 1
• Open Issues: 6
• Metadata Files:
  • Readme: README.md

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README

        
# ggtrendline: an R package for adding trendline and confidence interval to ggplot



[![cran version](http://www.r-pkg.org/badges/version/ggtrendline)](http://cran.rstudio.com/web/packages/ggtrendline) 

[![rstudio mirror downloads](http://cranlogs.r-pkg.org/badges/grand-total/ggtrendline)](https://github.com/metacran/cranlogs.app)

## 1. Installing "ggtrendline" package in R

- Get the released version from CRAN:

		install.packages("ggtrendline")

- Or the development version from Github:

		install.packages("devtools")

		devtools::install_github("PhDMeiwp/ggtrendline@master", force = TRUE)

		library(ggtrendline)

## 2. Using "ggtrendline" package

	

     library(ggplot2)

	 library(ggtrendline)

     x <- c(1, 3, 6, 9,  13,   17)

     y <- c(5, 8, 11, 13, 13.2, 13.5)

### 2.1 default ("line2P")

     ggtrendline(x, y, model = "line2P")  





### 2.2 add geom_point()

     ggtrendline(x, y, model = "line3P") + geom_point(aes(x, y)) + theme_bw()



### 2.3 CI lines only, without CI filling

     ggtrendline(x, y, model = "log2P", CI.fill = NA) + 

			geom_point(aes(x, y))+ theme_classic() 

	



### 2.4 set the regression line and geom_point()

     ggtrendline(x, y, model = "exp2P", linecolor = "blue", linetype = 1, linewidth = 1) + 

             geom_point(aes(x, y), color = "blue", shape = 1, size = 3)  



		

### 2.5 set confidence interval

     ggtrendline(x, y, model = "exp3P", CI.level = 0.99, 

                CI.fill = "red", CI.alpha = 0.1, CI.color = NA, CI.lty = 2, CI.lwd = 1.5) + 

             geom_point(aes(x, y)) 



		

### 2.6 one trendline with different points belonged to multiple groups.

		library(ggplot2)

		library(ggtrendline)

		data("iris")

		x <- iris$Petal.Width

		y <- iris$Petal.Length

		group <- iris$Species

		ggtrendline(x,y,"exp3P") + geom_point(aes(x,y,color=group))



## 3. Details

### 3.1 Description

The 'ggtrendline' package is developed for adding **trendline and confidence interval** of **linear or nonlinear regression** model, and

    **showing equation, R square, and P value**  to 'ggplot' as simple as possible. 


For a general overview of the methods used in this package, 

	see Ritz and Streibig (2008)  and 

	Greenwell and Schubert Kabban (2014) .

### 3.2 ggtrendline function

The built-in 'ggtrendline()' function includes the following models:



"line2P", formula as: y = a\*x + b;


"line3P", y = a\*x^2 + b\*x + c;


"log2P" , y = a\*ln(x) + b; 


"exp2P", y = a\*exp(b\*x); 


"exp3P", y = a\*exp(b\*x) + c;


"power2P", y = a\*x^b;


"power3P", y = a\*x^b + c.

### 3.3 stat_eq and stat_rrp functions

**The built-in 'stat_eq()' and 'stat_rrp()' functions can be used separately, i.e., not together with 'ggtrendline()' function.**

To see more details, you can run the following R code if you have the "ggtrendline" package installed:

    library(ggtrendline)

    ?ggtrendline

	?stat_eq

	?stat_rrp

## 4. Contact

- Bugs and feature requests can be filed to https://github.com/PhDMeiwp/ggtrendline/issues. 

- BTW, [Pull requests](https://github.com/PhDMeiwp/ggtrendline/pulls) are also welcome.

## 5. Acknowledgements

We would like to express our special thanks to **Uwe Ligges, Gregor Seyer, and CRAN team** for their valuable comments to the 'ggtrendline' package.