https://github.com/SuperElastix/SimpleElastix

Multi-lingual medical image registration library
https://github.com/SuperElastix/SimpleElastix

elastix image-registration simpleitk

Last synced: 29 days ago
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Multi-lingual medical image registration library

• Host: GitHub
• URL: https://github.com/SuperElastix/SimpleElastix
• Owner: SuperElastix
• License: apache-2.0
• Archived: true
• Created: 2014-11-20T09:51:10.000Z (about 10 years ago)
• Default Branch: master
• Last Pushed: 2023-06-15T10:15:41.000Z (over 1 year ago)
• Last Synced: 2024-08-04T00:13:12.598Z (4 months ago)
• Topics: elastix, image-registration, simpleitk
• Language: SWIG
• Homepage: http://simpleelastix.github.io
• Size: 19.1 MB
• Stars: 507
• Watchers: 22
• Forks: 149
• Open Issues: 172
• Metadata Files:
  • Readme: README
  • Contributing: .github/CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: CODE_OF_CONDUCT.md

Awesome Lists containing this project

• awesome-biological-image-analysis - SimpleElastix - Multi-lingual medical image registration library. (Other)

README

        
Kitware Local Git Setup Scripts

Introduction

------------

This is a collection of local Git development setup scripts meant for

inclusion in project source trees to aid their development workflow.

Project-specific information needed by the scripts may be configured

in a "config" file added next to them in the project.

Import

------

A project may import these scripts into their source tree by

initializing a subtree merge.  Bring up a Git prompt and set the

current working directory inside a clone of the target project.

Fetch the "setup" branch from the GitSetup repository:

 $ git fetch ../GitSetup setup:setup

Prepare to merge the branch but place the content in a subdirectory.

Any prefix (with trailing '/') may be chosen so long as it is used

consistently within a project through the rest of these instructions:

 $ git merge -s ours --no-commit setup

 $ git read-tree -u --prefix=Utilities/GitSetup/ setup

Commit the merge with an informative message:

 $ git commit

 ------------------------------------------------------------------------

 Merge branch 'setup'

 Add Utilities/GitSetup/ directory using subtree merge from

 the general GitSetup repository "setup" branch.

 ------------------------------------------------------------------------

Optionally add to the project ".gitattributes" file the line

 /Utilities/GitSetup export-ignore

to exclude the GitSetup directory from inclusion by "git archive"

since it does not make sense in source tarballs.

Configuration

-------------

Read the "Project configuration instructions" comment in each script.

Add a "config" file next to the scripts with desired configuration

(optionally copy and modify "config.sample").  For example, to

configure the "setup-hooks" script:

 $ git config -f Utilities/GitSetup/config hooks.url "$url"

where "$url" is the project repository publishing the "hooks" branch.

When finished, add and commit the configuration file:

 $ git add Utilities/GitSetup/config

 $ git commit

Update

------

A project may update these scripts from the GitSetup repository.

Bring up a Git prompt and set the current working directory inside a

clone of the target project.  Fetch the "setup" branch from the

GitSetup repository:

 $ git fetch ../GitSetup setup:setup

Merge the "setup" branch into the subtree:

 $ git merge -X subtree=Utilities/GitSetup setup

where "Utilities/GitSetup" is the same prefix used during the import

setup, but without a trailing '/'.

License

-------

Distributed under the Apache License 2.0.

See LICENSE and NOTICE for details.