Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/SyneRBI/SIRF
Main repository for the CCP SynerBI software
https://github.com/SyneRBI/SIRF
image-reconstruction medical-imaging pet-mr
Last synced: 2 months ago
JSON representation
Main repository for the CCP SynerBI software
- Host: GitHub
- URL: https://github.com/SyneRBI/SIRF
- Owner: SyneRBI
- License: other
- Created: 2016-11-26T14:19:12.000Z (about 8 years ago)
- Default Branch: master
- Last Pushed: 2024-07-25T15:43:20.000Z (6 months ago)
- Last Synced: 2024-07-25T18:15:30.502Z (6 months ago)
- Topics: image-reconstruction, medical-imaging, pet-mr
- Language: C++
- Homepage: http://www.ccpsynerbi.ac.uk
- Size: 9.39 MB
- Stars: 58
- Watchers: 25
- Forks: 29
- Open Issues: 152
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGES.md
- Contributing: CONTRIBUTING.md
- License: LICENSE.txt
- Citation: CITATION.cff
Awesome Lists containing this project
- awesome-medphys - SIRF - SIRF is a software toolkit for tomographic image reconstruction developed by the Synergistic Image Reconstruction Framework (SIRF) consortium. (Applications)
README
# Synergistic Image Reconstruction Framework
[![gh-action-badge]][gh-action-link]
[![style-badge]][style-link]
[![zenodo-badge]][zenodo-link]
This software is the main output of [SyneRBI](https://www.ccpsynerbi.ac.uk), the Collaborative Computational
Platform for Synergistic Reconstruction for Biomedical Imaging (formerly CCP PETMR).
Please start with our latest [User's Guide](doc/UserGuide.md).
## How to obtain SIRF
There are multiple ways to obtain a binary version of SIRF, please check them out in our documentation page [how to obtain SIRF](https://github.com/SyneRBI/SIRF/wiki/How-to-obtain-SIRF)
or [our Wiki page for installation instructions](https://github.com/SyneRBI/SIRF/wiki/Installation-instructions).
## Where is everything installed?
SIRF largely follows the usual directory structure with some minor tweaks. When using
the default options when building SIRF, you will get (most of the) following, depending
what was found/built:
```
/
bin/ # executables
lib/ # libraries
python/ # Python files
matlab/ # MATLAB files
share/SIRF-V.v/ # versioned location (e.g. SIRF-3.0)
doc/ # doxumentation
doxygen/ # C++ documentation files generated by doxygen
examples/ # example scripts
data/ # data used in example scripts
```
[coveralls-badge]: https://coveralls.io/repos/github/CCPPETMR/SIRF/badge.svg?branch=master
[coveralls]: https://coveralls.io/github/CCPPETMR/SIRF?branch=master
[codecov-badge]: https://codecov.io/gh/SyneRBI/SIRF/branch/master/graph/badge.svg
[codecov]: https://codecov.io/gh/SyneRBI/SIRF
[gh-action-badge]: https://github.com/SyneRBI/SIRF/actions/workflows/build-test.yml/badge.svg
[gh-action-link]: https://github.com/SyneRBI/SIRF/actions/workflows/build-test.yml
[travis-badge]: https://travis-ci.org/SyneRBI/SIRF.svg?branch=master
[travis]: https://travis-ci.org/SyneRBI/SIRF
[style-badge]: https://app.codacy.com/project/badge/Grade/392861b4085f4f438d12c41029f86b47
[style-link]: https://app.codacy.com/gh/SyneRBI/SIRF/dashboard?utm_source=gh&utm_medium=referral&utm_content=&utm_campaign=Badge_grade
[zenodo-badge]: https://zenodo.org/badge/DOI/10.5281/zenodo.2707911.svg
[zenodo-link]: https://doi.org/10.5281/zenodo.2707911