https://github.com/TileDB-Inc/TileDB-R

R interface to TileDB: The Modern Database
https://github.com/TileDB-Inc/TileDB-R

array hdfs r s3 storage-manager tiledb

Last synced: 3 months ago
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R interface to TileDB: The Modern Database

• Host: GitHub
• URL: https://github.com/TileDB-Inc/TileDB-R
• Owner: TileDB-Inc
• License: other
• Created: 2017-05-19T23:07:10.000Z (over 7 years ago)
• Default Branch: master
• Last Pushed: 2024-07-31T21:10:27.000Z (3 months ago)
• Last Synced: 2024-08-01T00:26:31.504Z (3 months ago)
• Topics: array, hdfs, r, s3, storage-manager, tiledb
• Language: R
• Homepage: https://tiledb-inc.github.io/TileDB-R
• Size: 13 MB
• Stars: 101
• Watchers: 26
• Forks: 18
• Open Issues: 5
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS.md
  • License: LICENSE

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# 

The TileDB R package offers an [R](https://www.r-project.org/) interface to

the [modern database](https://github.com/TileDB-Inc/TileDB) by [TileDB](https://tiledb.com/).

## Documentation

Documentation is available for [the R

package](https://tiledb-inc.github.io/TileDB-R/) as well as for the [TileDB

API](https://docs.tiledb.com/main/).

## Installation

TileDB Embedded needs to be present, and can be installed first (from a package or from source) for

the TileDB R package to build and link correctly. Alternatively, if no system installation is found,

a precompiled shared library is used during the installation of this R package.

The TileDB R package has been published on [CRAN](https://cran.r-project.org/) and be

installed directly via

    > install.packages("tiledb")

as usual.

The most recent released version can be installed from

[Github](https://github.com/TileDB-Inc/TileDB-R) using the package

[remotes](https://cran.r-project.org/package=remotes).

    > if (!requireNamespace("remotes",quietly=TRUE)) install.packages("remotes")

    > remotes::install_github("TileDB-Inc/TileDB-R")

    ...

    > library(tiledb)

    TileDB R 0.29.0 with TileDB Embedded 2.25.0 on Ubuntu 24.04.

    See https://tiledb.com for more information about TileDB.

    > help(package=tiledb)

If the TileDB library is installed in a custom location, you need to pass the explicit path:

    > remotes::install_github("TileDB-Inc/TileDB-R",

          args="--configure-args='--with-tiledb=/path/to/tiledb'")

Note that the TileDB R package is always developed and tested against the latest stable version

of TileDB, but should also build against the newest development version.

## Quick Links

- [TileDB Installation](https://docs.tiledb.com/main/how-to/installation/quick-install)

- [TileDB R Package Docs](https://tiledb-inc.github.io/TileDB-R/)

- [TileDB Support Forum](https://forum.tiledb.com/)

## Copyright

The TileDB R package is Copyright 2018-2024 TileDB, Inc

## License

MIT