https://github.com/abhijeetsingh1704/clean_dna_fasta

Program to clean DNA fasta sequences
https://github.com/abhijeetsingh1704/clean_dna_fasta

character cleanup dna-sequences fasta-sequences

Last synced: about 1 month ago
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Program to clean DNA fasta sequences

• Host: GitHub
• URL: https://github.com/abhijeetsingh1704/clean_dna_fasta
• Owner: abhijeetsingh1704
• License: gpl-3.0
• Created: 2019-02-09T22:46:29.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2022-05-27T14:21:21.000Z (over 2 years ago)
• Last Synced: 2023-10-20T16:05:36.474Z (about 1 year ago)
• Topics: character, cleanup, dna-sequences, fasta-sequences
• Language: Shell
• Size: 18.6 KB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# clean_DNA_fasta

Program to clean DNA fasta sequences and removes and illegal characters in sequence with "Ns"

# Usage 

```

$ bash clean_DNA_fasta.sh 

```

# Or  

```

$ bash clean_DNA_fasta.sh 

```

## Citation

Singh A. clean_DNA_fasta: Program to clean DNA fasta sequences and removes and illegal characters in sequence or any non-natural residue. ResearchGate 2019. https://doi.org/10.13140/RG.2.2.20873.77921; Available at: https://github.com/abhijeetsingh1704/clean_DNA_fasta