https://github.com/acastanza/salmon.alevin.quant

Salmon Alevin (single cell) quantification wrapper module for GenePattern.
https://github.com/acastanza/salmon.alevin.quant

Last synced: about 1 month ago
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Salmon Alevin (single cell) quantification wrapper module for GenePattern.

• Host: GitHub
• URL: https://github.com/acastanza/salmon.alevin.quant
• Owner: ACastanza
• License: other
• Created: 2021-01-28T01:22:38.000Z (over 4 years ago)
• Default Branch: main
• Last Pushed: 2022-04-19T20:51:39.000Z (about 3 years ago)
• Last Synced: 2023-04-26T07:28:15.467Z (about 2 years ago)
• Language: Shell
• Homepage:
• Size: 792 KB
• Stars: 1
• Watchers: 1
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# Salmon.Alevin.Quant

Quantification and analysis of 3' tagged-end single-cell sequencing data using Salmon's Alevin function (v 1.5.2)\

See: [The Alevin Documentation](https\://salmon.readthedocs.io/en/latest/alevin.html) for detailed usage guidelines