https://github.com/adamtaranto/density-mapr

An R workflow for creating heat-maps representing the spatial association between two genomic feature sets
https://github.com/adamtaranto/density-mapr

Last synced: about 2 months ago
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An R workflow for creating heat-maps representing the spatial association between two genomic feature sets

• Host: GitHub
• URL: https://github.com/adamtaranto/density-mapr
• Owner: Adamtaranto
• License: mit
• Created: 2013-12-17T03:31:52.000Z (about 11 years ago)
• Default Branch: master
• Last Pushed: 2017-04-05T12:19:57.000Z (almost 8 years ago)
• Last Synced: 2024-10-13T20:45:33.390Z (3 months ago)
• Language: Perl
• Size: 2.34 MB
• Stars: 1
• Watchers: 3
• Forks: 2
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
density-Mapr

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An R workflow for creating heatmaps representing the spatial association between two genomic feature sets.

Adapted from: Saunders, Diane GO, et al. "Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes." Plant-Pathogen Interactions: Methods and Protocols (2014): 29-51.

Sample data and dependencies can be found at: http://figshare.com/authors/Sylvain_Raffaele/415674