https://github.com/adamtaranto/methfreq

Calculate observed vs expected instances of DNA-methylation motifs in gene sequences
https://github.com/adamtaranto/methfreq

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Calculate observed vs expected instances of DNA-methylation motifs in gene sequences

• Host: GitHub
• URL: https://github.com/adamtaranto/methfreq
• Owner: Adamtaranto
• License: mit
• Created: 2014-06-07T07:42:50.000Z (over 10 years ago)
• Default Branch: master
• Last Pushed: 2015-12-18T05:33:00.000Z (about 9 years ago)
• Last Synced: 2024-10-13T20:45:34.633Z (3 months ago)
• Language: Python
• Size: 5.86 KB
• Stars: 0
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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methFreq

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Calculate observed vs expected instances of DNA-methylation motifs in gene sequences

As for figure 1 in Foret et al. 2009

Foret, S., Kucharski, R., Pittelkow, Y., Lockett, G. A., & Maleszka, R. (2009). Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes. BMC Genomics, 10(1), 472. doi:10.1186/1471-2164-10-472