https://github.com/adeschen/docker-arcashla
Docker image for arcasHLA software
https://github.com/adeschen/docker-arcashla
docker-image hla hla-database hla-typing
Last synced: 9 months ago
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Docker image for arcasHLA software
- Host: GitHub
- URL: https://github.com/adeschen/docker-arcashla
- Owner: adeschen
- Created: 2019-06-07T18:20:26.000Z (about 7 years ago)
- Default Branch: master
- Last Pushed: 2020-01-27T20:39:30.000Z (over 6 years ago)
- Last Synced: 2025-03-18T14:49:35.296Z (over 1 year ago)
- Topics: docker-image, hla, hla-database, hla-typing
- Language: Dockerfile
- Homepage:
- Size: 8.79 KB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# arcasHLA Docker
A Docker image for **arcasHLA** software.
## Sofware version
* [arcasHLA](https://github.com/RabadanLab/arcasHLA) from github hash _450e12c_ which includes correction for missing prior in date of May 7th 2019
* [HLA database](https://github.com/ANHIG/IMGTHLA) v3.37.0
* [kallisto](https://github.com/pachterlab/kallisto) v0.44.0
* [Samtools](https://github.com/samtools/samtools/) v1.9
* [bedtools](https://github.com/arq5x/bedtools2) v2.27.1
## Authors ##
[Astrid Deschênes](http://ca.linkedin.com/in/astriddeschenes "Astrid Deschênes")