https://github.com/afrendeiro/toolkit

A toolkit for NGS analysis with Python
https://github.com/afrendeiro/toolkit

atac-seq bioinformatics chip-seq looper ngs ngs-analysis project-management pypiper rna-seq

Last synced: 3 months ago
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A toolkit for NGS analysis with Python

• Host: GitHub
• URL: https://github.com/afrendeiro/toolkit
• Owner: afrendeiro
• License: gpl-3.0
• Created: 2017-05-30T16:59:13.000Z (over 7 years ago)
• Default Branch: master
• Last Pushed: 2023-01-18T17:12:08.000Z (about 2 years ago)
• Last Synced: 2024-09-13T02:08:54.693Z (5 months ago)
• Topics: atac-seq, bioinformatics, chip-seq, looper, ngs, ngs-analysis, project-management, pypiper, rna-seq
• Language: Python
• Homepage: http://ngs-toolkit.readthedocs.io
• Size: 1.56 MB
• Stars: 14
• Watchers: 4
• Forks: 4
• Open Issues: 13
• Metadata Files:
  • Readme: README.md

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README

        

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# ngs-toolkit

This is my NGS analysis toolkit: ``ngs_toolkit``.

Head to the [documentation](http://ngs-toolkit.readthedocs.io/) to see how to install and use the toolkit, and have a look at the catalogue of available functions.

Install with:

```bash

pip install ngs-toolkit

```

You might need to add a ``--user`` flag to the above command.