https://github.com/aldro61/patric_tools

Python package to interact with the PATRIC database (https://www.patricbrc.org)
https://github.com/aldro61/patric_tools

antibiotic-resistance database genomics patric

Last synced: 9 months ago
JSON representation

Python package to interact with the PATRIC database (https://www.patricbrc.org)

• Host: GitHub
• URL: https://github.com/aldro61/patric_tools
• Owner: aldro61
• License: gpl-3.0
• Created: 2016-10-13T16:05:15.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2020-01-08T19:21:33.000Z (over 6 years ago)
• Last Synced: 2023-10-20T16:21:13.755Z (over 2 years ago)
• Topics: antibiotic-resistance, database, genomics, patric
• Language: Jupyter Notebook
• Size: 56.6 KB
• Stars: 9
• Watchers: 5
• Forks: 4
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.MD

Awesome Lists containing this project

README

          
[![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](http://www.gnu.org/licenses/gpl-3.0)

[![Build Status](https://travis-ci.org/aldro61/patric_tools.svg?branch=master)](https://travis-ci.org/aldro61/patric_tools)

# PATRIC tools

A Python package to interact with the PATRIC database (https://www.patricbrc.org)

## Notes

* This package is highly dependant on the structure of the FTP directories at PATRIC. If the structure changes, parts of the code may need to be updated.

## Disclaimer

This is not an official tool of the PATRIC database. It is a package that I use for my personal interaction with the database.