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https://github.com/alicewriteswrongs/fastqtrim

Last synced: about 1 month ago
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Host: GitHub
URL: https://github.com/alicewriteswrongs/fastqtrim
Owner: alicewriteswrongs
License: other
Created: 2014-01-14T18:11:55.000Z (about 11 years ago)
Default Branch: master
Last Pushed: 2014-01-14T18:11:57.000Z (about 11 years ago)
Last Synced: 2024-10-30T06:59:27.827Z (3 months ago)
Size: 109 KB
Stars: 0
Watchers: 2
Forks: 0
Open Issues: 0
Metadata Files:
- Readme: README.md
- License: LICENSE.txt

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README

        #Trimmer for fastq files

A quick python script for trimming a specified number of bases from the beginning of each read in a fastq file.

###Usage

usage: python trimmer.py [-h] [-s START] [INPUT] [OUTPUT]

*	[-s START] trims all bases before this point from the alignment

*	[INPUT]	file to be modified

*	[OUTPUT] defaults to stdout, file write not yet implemented