https://github.com/amazingang/emergeprobv1

Code for paper: Emergence of Probabilistic Representation in Cortical Network of Mice Primary Visual Cortex (under review)
https://github.com/amazingang/emergeprobv1

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Code for paper: Emergence of Probabilistic Representation in Cortical Network of Mice Primary Visual Cortex (under review)

• Host: GitHub
• URL: https://github.com/amazingang/emergeprobv1
• Owner: AmazingAng
• Created: 2021-01-25T08:58:36.000Z (over 5 years ago)
• Default Branch: main
• Last Pushed: 2021-02-06T12:04:13.000Z (over 5 years ago)
• Last Synced: 2025-04-03T13:43:57.643Z (over 1 year ago)
• Language: R
• Size: 41 KB
• Stars: 3
• Watchers: 2
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
# EmergeProbV1

Code for paper: Emergence of Probabilistic Representation in Cortical Network of Mice Visual Cortex (under review). All codes are written in [R](https://www.r-project.org/). The code uses parallel computing to speed-up simulation, which takes ~15 min to run 15 repetitions of the simulation on a server using 15 cores. If your computer has less cores, try to set repeat_n (number of repetition) smaller to save time. 

## Code for each figure (Figure 3 & 5 are figures of experimental results)

Figure 1: Fig1_stripe_rearing_plot.R, Fig1_stripe_rearing_simulation.R

Figure 2 & 4: Fig24_cardianl_overrepresentation.R

Figure 6: Fig6_uniform_inh.R

Figure 7: Fig7_phase_plane.R

Figure 8: Fig8_bayesian.R

Useful functions: utils.R

## Dependent library in R:

Multi-processing library: parallel, foreach, doParallel

Other: circular, distr, radial, plotrix, phaseR