https://github.com/amnona/dbbact-calour

dbBact (https://dbbact.org) interface for Calour (https://github.com/biocore/calour) for microbiome 16S analysis
https://github.com/amnona/dbbact-calour

database microbiome microbiome-analysis

Last synced: 5 months ago
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dbBact (https://dbbact.org) interface for Calour (https://github.com/biocore/calour) for microbiome 16S analysis

• Host: GitHub
• URL: https://github.com/amnona/dbbact-calour
• Owner: amnona
• License: gpl-3.0
• Created: 2017-02-04T00:30:13.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2024-04-11T11:02:11.000Z (about 2 years ago)
• Last Synced: 2025-03-15T16:03:22.372Z (about 1 year ago)
• Topics: database, microbiome, microbiome-analysis
• Language: Jupyter Notebook
• Homepage:
• Size: 132 MB
• Stars: 1
• Watchers: 2
• Forks: 0
• Open Issues: 11
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • License: LICENSE.txt

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README

          
# dbbact-calour

Interface between the [dbBact](https://dbbact.org) database and [Calour](https://github.com/amnona/calour) microbiome analysis tool.

The interface enables querying dbBact about amplicon sequences as well as doing term enrichment analysis.

For details about dbBact, see [Nucleic Acids Research 2023](https://doi.org/10.1093/nar/gkad527) paper.