https://github.com/ap--/pado-tcga
pado dataset for The Cancer Genome Atlas on aws opendata
https://github.com/ap--/pado-tcga
Last synced: 8 months ago
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pado dataset for The Cancer Genome Atlas on aws opendata
- Host: GitHub
- URL: https://github.com/ap--/pado-tcga
- Owner: ap--
- License: mit
- Created: 2023-04-16T23:30:58.000Z (about 3 years ago)
- Default Branch: main
- Last Pushed: 2023-10-27T11:44:58.000Z (over 2 years ago)
- Last Synced: 2025-03-13T20:23:28.487Z (over 1 year ago)
- Language: Python
- Size: 8.79 KB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- Funding: .github/FUNDING.yml
- License: LICENSE
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README
# pado-tcga
Pado dataset for TCGA on AWS opendata
## Documentation
To load the latest release of the pado dataset:
```python
# pip install pado s3fs requests aiohttp
import fsspec
import pado
of = fsspec.open("zip:///::https://github.com/ap--/pado-tcga/releases/latest/download/pado-tcga-dataset.zip")
ds = pado.PadoDataset(of)
print(ds.describe())
```
## Acknowledgements
Build with :heart: by Andreas Poehlmann