https://github.com/applicativesystem/go-genomesummarizer

golang genome summarizer and implements a linear algebra
https://github.com/applicativesystem/go-genomesummarizer

bioinformatics bioinformatics-analysis genome-analysis genome-annotation genome-assembly golang

Last synced: 6 months ago
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golang genome summarizer and implements a linear algebra

• Host: GitHub
• URL: https://github.com/applicativesystem/go-genomesummarizer
• Owner: applicativesystem
• License: mit
• Created: 2024-11-14T11:39:11.000Z (11 months ago)
• Default Branch: main
• Last Pushed: 2024-11-14T13:41:24.000Z (11 months ago)
• Last Synced: 2024-12-16T02:12:03.824Z (10 months ago)
• Topics: bioinformatics, bioinformatics-analysis, genome-analysis, genome-annotation, genome-assembly, golang
• Language: Go
• Homepage:
• Size: 6.84 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

          
# go-genomesummarizer

- golang genome summarizer

- allows you to do all calculative stats on the genome and metagenome annotation. done

- estimates all descriptive and variance and all linear algebra options included. partial code completed

- writes a linear regression and a decision tree. partial code completed.

- one stop solution for the given gff and the fasta file, will summarize the genome, and run the machine learning models on the genome and metagenome annotations.

```

➜  go-genomesummarizer git:(main) ✗ go run main.go -h

Run the genome analyzer function and summarize the genome

Usage:

  genomesummarize [flags]

Flags:

  -G, --genomesummarize string   summarize the genome (default "genomeannotate")

  -h, --help                     help for genomesummarize

exit status

```

Gaurav Sablok