https://github.com/applicativesystem/maf-analyzer-awk
maf alignments from protein to genome alignments using awk
https://github.com/applicativesystem/maf-analyzer-awk
awk awk-programming-language awk-script bioinformatics genome-alignment genome-analysis genome-anntoation protein-alignment protein-alignments
Last synced: 6 months ago
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maf alignments from protein to genome alignments using awk
- Host: GitHub
- URL: https://github.com/applicativesystem/maf-analyzer-awk
- Owner: applicativesystem
- License: mit
- Created: 2024-08-17T19:57:16.000Z (about 1 year ago)
- Default Branch: main
- Last Pushed: 2024-08-17T19:58:29.000Z (about 1 year ago)
- Last Synced: 2024-12-16T02:12:07.818Z (10 months ago)
- Topics: awk, awk-programming-language, awk-script, bioinformatics, genome-alignment, genome-analysis, genome-anntoation, protein-alignment, protein-alignments
- Language: Awk
- Homepage:
- Size: 9.77 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# maf-diagonal-information
a maf diagonal information written in AWK for getting the specific corrdinates of the alignment present on the plus or the minus strand and getting their diagonal information so that it can be used as node. You can fork the test files for the alignment from here [genome alignments](https://github.com/lastz/lastz/tree/master/test_data)Gaurav Sablok \
University of Potsdam \
Potsdam,Germany