https://github.com/applicativesystem/metagenomics-abundance

normalizing metagenomics abundances based on OTU abundances.
https://github.com/applicativesystem/metagenomics-abundance

bacterial bacterial-genomes bacterial-genomics bioinformatics genome-analysis metagenomes metagenomics metagenomics-count

Last synced: 7 days ago
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normalizing metagenomics abundances based on OTU abundances.

• Host: GitHub
• URL: https://github.com/applicativesystem/metagenomics-abundance
• Owner: applicativesystem
• License: mit
• Created: 2024-08-21T18:30:30.000Z (4 months ago)
• Default Branch: main
• Last Pushed: 2024-08-21T20:16:21.000Z (4 months ago)
• Last Synced: 2024-11-10T20:18:12.991Z (about 1 month ago)
• Topics: bacterial, bacterial-genomes, bacterial-genomics, bioinformatics, genome-analysis, metagenomes, metagenomics, metagenomics-count
• Language: Python
• Homepage:
• Size: 1.95 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# ontology-annotation-count

- calculate the genome annotation for the microbiome and also for the other genomes.

- It will take a genome annotation or a text file and will prepare the count and also for the gene ontology analysis.

Gaurav Sablok \

University of Potsdam \

Potsdam,Germany