Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/applicativesystem/rust-samtools-generateid
rust-samtools generateid
https://github.com/applicativesystem/rust-samtools-generateid
bioinformatics genome-alignment genome-analysis genome-bioinformatics genome-sequence-analysis genome-sequencing samtools
Last synced: 7 days ago
JSON representation
rust-samtools generateid
- Host: GitHub
- URL: https://github.com/applicativesystem/rust-samtools-generateid
- Owner: applicativesystem
- License: mit
- Created: 2024-12-04T07:11:18.000Z (18 days ago)
- Default Branch: main
- Last Pushed: 2024-12-04T17:27:18.000Z (18 days ago)
- Last Synced: 2024-12-04T18:33:06.308Z (18 days ago)
- Topics: bioinformatics, genome-alignment, genome-analysis, genome-bioinformatics, genome-sequence-analysis, genome-sequencing, samtools
- Language: Rust
- Homepage:
- Size: 3.04 MB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# rust-samtools-generateid
- rust-samtools generateid
- rust-samtools generateids for indexing and for use with the rust-samtools-genomecapture.
- this allows you to use with all the rust-samtools functions just like fastidx of the samtools.
- general note: Incase of Golang and RUST, please see the last commit message and if it says compiled binary then it is completed or else still in development version.
```
cargo build
```
- to run the binary
```
./rust-samtools-generateid ./sample-files/Col0_C1.100k.sam
```
Gaurav Sablok