https://github.com/applicativesystem/sqlite3-genome

python implementation of sqlite3 for genome assembly
https://github.com/applicativesystem/sqlite3-genome

bioinformatics database-management database-migrations genome-analysis python-app python3 sqlite3 sqlite3-database

Last synced: 6 months ago
JSON representation

python implementation of sqlite3 for genome assembly

• Host: GitHub
• URL: https://github.com/applicativesystem/sqlite3-genome
• Owner: applicativesystem
• License: mit
• Created: 2024-08-17T07:35:34.000Z (11 months ago)
• Default Branch: main
• Last Pushed: 2024-09-11T12:51:20.000Z (10 months ago)
• Last Synced: 2024-11-10T20:18:18.675Z (8 months ago)
• Topics: bioinformatics, database-management, database-migrations, genome-analysis, python-app, python3, sqlite3, sqlite3-database
• Language: Python
• Homepage:
• Size: 70.2 MB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
# sqlite3-genome

- a sqllite rendering for the genome infrastucture.

- files needed: genome file, gff files, pangenome graphs, linear pangenome graphs.

- this is also compatible with the pymongo, javascript and php. 

- below is the UML for the following



Gaurav Sablok \

University of Potsdam \

Potsdam,Germany