https://github.com/arkinjo/evodevo3

https://github.com/arkinjo/evodevo3

Last synced: 6 months ago
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• Host: GitHub
• URL: https://github.com/arkinjo/evodevo3
• Owner: arkinjo
• License: mit
• Created: 2024-12-05T03:47:25.000Z (over 1 year ago)
• Default Branch: main
• Last Pushed: 2025-02-02T01:02:36.000Z (over 1 year ago)
• Last Synced: 2025-02-02T02:18:30.946Z (over 1 year ago)
• Language: Go
• Size: 6.37 MB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# evodevo3

## Commands

### genenv

Generate environments and save them in a JSON file.

### runsim

Run evolutionary simulations.

### gpplot

Generate a genotype-phenotype plot from trajectory files generated by **runsim**.

### xpca

SVD analysis of cross-covariance matrices.

### varenv

Compare initial plastic responses in various environments.

### aprgeno

Analyze the genetic contributions to adaptive plastic responses.

### simanc

For each generation produced by **runsim**, develop individuals under the ancestral environment (without natural selection).