https://github.com/ashander/phenoecosim
Simulate evolutionary, plastic and demographic responses to changing environments (moving optima)
https://github.com/ashander/phenoecosim
c-plus-plus dissertation evolutionary r simulation
Last synced: about 1 month ago
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Simulate evolutionary, plastic and demographic responses to changing environments (moving optima)
- Host: GitHub
- URL: https://github.com/ashander/phenoecosim
- Owner: ashander
- License: mit
- Created: 2013-11-05T00:32:15.000Z (over 12 years ago)
- Default Branch: master
- Last Pushed: 2016-06-27T02:40:50.000Z (almost 10 years ago)
- Last Synced: 2025-01-29T08:47:39.755Z (over 1 year ago)
- Topics: c-plus-plus, dissertation, evolutionary, r, simulation
- Language: R
- Homepage:
- Size: 4.68 MB
- Stars: 1
- Watchers: 2
- Forks: 0
- Open Issues: 1
-
Metadata Files:
- Readme: README.Rmd
- Changelog: Changelog.md
- License: LICENSE
Awesome Lists containing this project
README
phenoecosim
===========
## Simulations of eco-evo trait and demographic dynamics under changing environments
Jaime Ashander and Luis-Miguel Chevin
Simulate evolutionary, plastic, and ecological responses to
changing environments, including discrete shifts and constantly
moving optima.
Built with [Armadillo](http://arma.sourceforge.net/) and [Rcpp](http://www.rcpp.org/) (via RcppArmadillo package).
Please cite as below and use the DOI: [](https://zenodo.org/badge/latestdoi/17403/ashander/phenoecosim)
>Jaime Ashander and Luis-Miguel Chevin (2015). phenoecosim: Simulations of eco-evo trait and demographic dynamics under changing environments. R package version v0.2.4.
### Running in docker
This package includes a Dockerfile built on top of the rocker/rstudio image.
We have also hosted the image on dockerhub, so you can easily get an Rstudio
server setup for development running on the cloud:
```bash
docker run -d -p 80:8787 -e USER= -e PASSWORD= ashander/phenoecosim
```
Navigating to the public DNS of the server will give you an Rstudio login screen.
For further details [see the rocker wiki](https://github.com/rocker-org/rocker/wiki/Using-the-RStudio-image)