https://github.com/audy/banana

A tool for handling multiplexed 454 and Illumina generated sequence data
https://github.com/audy/banana

Last synced: about 21 hours ago
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A tool for handling multiplexed 454 and Illumina generated sequence data

• Host: GitHub
• URL: https://github.com/audy/banana
• Owner: audy
• License: mit
• Created: 2011-05-02T19:49:42.000Z (over 13 years ago)
• Default Branch: master
• Last Pushed: 2015-04-28T03:21:59.000Z (over 9 years ago)
• Last Synced: 2023-03-11T01:20:45.027Z (over 1 year ago)
• Language: Python
• Homepage:
• Size: 109 KB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: readme.md
  • License: license.md

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README

        
# Banana

## Split

Austin G. Davis-Richardson

---

This script splits Illumina QSEQ format reads by the barcodes you specify!

  Usage: python banana.py config.yaml reads/ output/

## Config.yaml

see example.yaml

This will split reads from lane 1 into two files (one for each barcode).