https://github.com/auneri/metaimageio

Support for reading and writing images in MetaIO file format.
https://github.com/auneri/metaimageio

matlab python

Last synced: 3 months ago
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Support for reading and writing images in MetaIO file format.

• Host: GitHub
• URL: https://github.com/auneri/metaimageio
• Owner: auneri
• License: mit
• Created: 2021-12-23T02:28:04.000Z (about 3 years ago)
• Default Branch: main
• Last Pushed: 2023-10-25T20:28:23.000Z (over 1 year ago)
• Last Synced: 2024-10-04T21:45:29.959Z (4 months ago)
• Topics: matlab, python
• Language: Python
• Homepage: https://auneri.github.io/MetaImageIO/
• Size: 80.1 KB
• Stars: 5
• Watchers: 2
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • License: LICENSE.md

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README

        
# MetaImageIO

Support for reading and writing images in [MetaIO](https://itk.org/Wiki/ITK/MetaIO/Documentation) file format.

[![license](https://img.shields.io/github/license/auneri/MetaImageIO)](https://github.com/auneri/metaimageio/blob/main/LICENSE.md)

[![build](https://img.shields.io/github/actions/workflow/status/auneri/MetaImageIO/main.yml)](https://github.com/auneri/metaimageio/actions)

[![pypi](https://img.shields.io/pypi/v/metaimageio)](https://pypi.org/project/metaimageio)

[![conda-forge](https://img.shields.io/conda/vn/conda-forge/metaimageio)](https://anaconda.org/conda-forge/metaimageio)

[![matlab-file-exchange](https://www.mathworks.com/matlabcentral/images/matlab-file-exchange.svg)](https://www.mathworks.com/matlabcentral/fileexchange/104070-metaimageio)

## Getting started in Python

Install using `pip install metaimageio` or `conda install -c conda-forge metaimageio`.

```python

import metaimageio

image, meta = metaimageio.read('/path/to/input.mha')

metaimageio.write('/path/to/output.mha', image, ElementSpacing=meta['ElementSpacing'])

```

Add to [imageio](https://imageio.readthedocs.io) plugins.

```python

import imageio

metaimageio.imageio()

image = imageio.imread('/path/to/input.mha')

meta = image.meta

```

## Getting started in MATLAB

Install using the [Add-On Manager](https://www.mathworks.com/help/matlab/matlab_env/get-add-ons.html).

```matlab

[image, meta] = metaimageio.read('/path/to/input.mha');

metaimageio.write('/path/to/output.mha', image, 'ElementSpacing', meta.ElementSpacing);

```

Add to [image file format registry](https://www.mathworks.com/help/matlab/ref/imformats.html).

```matlab

metaimageio.imformats();

image = imread('/path/to/input.mha');

meta = imfinfo('/path/to/input.mha');

```