https://github.com/autodesk/biomolecular-design-database

The Biomolecular Design Database Project is a web application that allows users to share, search and use nucleic acid nanotechnology designs. This includes DNA Origami, RNA Origami, DNA Bricks and many other types of systems.
https://github.com/autodesk/biomolecular-design-database

Last synced: 5 days ago
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The Biomolecular Design Database Project is a web application that allows users to share, search and use nucleic acid nanotechnology designs. This includes DNA Origami, RNA Origami, DNA Bricks and many other types of systems.

• Host: GitHub
• URL: https://github.com/autodesk/biomolecular-design-database
• Owner: Autodesk
• Created: 2018-10-02T21:22:00.000Z (about 6 years ago)
• Default Branch: master
• Last Pushed: 2019-05-12T21:49:53.000Z (over 5 years ago)
• Last Synced: 2024-04-13T22:59:02.288Z (7 months ago)
• Language: JavaScript
• Size: 14.9 MB
• Stars: 15
• Watchers: 7
• Forks: 7
• Open Issues: 12
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md

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README

        
# Biomolecular Design Database




The Biomolecular Design Database Project is a web application that allows users to share, search and use nucleic acid nanotechnology designs. This includes DNA Origami, RNA Origami, DNA Bricks and many other types of systems.

## Contributors and how you can contribute




We currently have a single maintainer: Joseph Schaeffer .

The primary developer for the initial version was [Rut Patel](https://github.com/rutpatel). Scientific advisors were Joseph and [Ebbe Andersen](http://bion.au.dk).

Please check out [CONTRIBUTING.md](CONTRIBUTING.md) for how you can contribute.

## Application Stack


 

This Web Application is developed with ReactJS frontend, Node.js backend and uses PostgreSQL database.

## Usage




### Quick Start

* STEP 1: Running Server Side 


-> From the console (in the project directory), do `cd ./bddbserver`. The database and Node.js application can be started using `docker-compose` 

`docker-compose up`

This will start the Node.js application on port 8000 on the docker machine. 

* STEP 2: Running Client Side 


-> From the console (in the project directory), do `cd ./bddbclient`. The reactJS frontend can be started using `docker-compose` 

`docker-compose up`

This will start the client side application on port 3000 on the docker machine. 

For S3 stored image functionality you will need AWS credentials (access key/secret key) that have access to the S3 buckets referenced in the `src/routes/files.js` (and those buckets may need to be changed to a new name for your installation).