https://github.com/awtkns/bdc

STEM Fellowship Big Data Challenge 2020: Using big data to analyse the effectiveness of diagnostic and treatment modalities for breast and prostate cancer in countries with variable levels of development.
https://github.com/awtkns/bdc

Last synced: 4 days ago
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STEM Fellowship Big Data Challenge 2020: Using big data to analyse the effectiveness of diagnostic and treatment modalities for breast and prostate cancer in countries with variable levels of development.

• Host: GitHub
• URL: https://github.com/awtkns/bdc
• Owner: awtkns
• Created: 2020-05-23T03:54:58.000Z (over 4 years ago)
• Default Branch: master
• Last Pushed: 2021-03-10T19:18:07.000Z (over 3 years ago)
• Last Synced: 2024-10-15T21:05:06.851Z (28 days ago)
• Language: Jupyter Notebook
• Homepage: https://bdc.wtkns.dev
• Size: 20.8 MB
• Stars: 1
• Watchers: 3
• Forks: 0
• Open Issues: 2
• Metadata Files:
  • Readme: README.md

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README

        
# BDC 2020

![Node.js CI](https://github.com/adam-watkins/bdc/workflows/Node.js%20CI/badge.svg?branch=master)

![API](https://img.shields.io/website?label=api&style=plastic&url=https%3A%2F%2Fawatkins.ca)

Use conda to install requirements.

```

conda env create -f env.yml

conda activate bdc

``` 

## Build and Run Backend

Make sure you are in your bdc conda env, or have installed the requirements with pip. First set some environment variables.

```bash

# linux

$ export FLASK_ENV=development

# windows

$ set FLASK_ENV=development

```

Now run the backend server.

```bash

$ cd backend

$ flask run

```

## Build and Run Frontend

Make sure you have NodeJs 14.3.0 (12.16.3 should also work). If you installed the conda env then you have already installed nodejs.

```bash

$ cd frontend

# install dependencies

$ npm install

# serve with hot reload at localhost:3000

$ npm run dev

```

## Deployment

The frontend is automatically built and served after every push to master.  It can be found [here](bdc-theta.now.sh).

Currently the backend is being hosted on a google compute engine server.  To update the app make sure you have access to the server.

To update and start the backend.

```bash

$ cd /home/bdc

$ sudo git pull

$ sudo docker-compose up --build -d

```