https://github.com/b-cubed-eu/integrate-indicator-software

Scripts to explore the streamlining and integration of software (with focus on R packages) related to the calculation of indicators based on biodiversity data cubes
https://github.com/b-cubed-eu/integrate-indicator-software

biodiversity-indicators data-cubes r r-packages software-integration software-streamlining

Last synced: 20 days ago
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Scripts to explore the streamlining and integration of software (with focus on R packages) related to the calculation of indicators based on biodiversity data cubes

• Host: GitHub
• URL: https://github.com/b-cubed-eu/integrate-indicator-software
• Owner: b-cubed-eu
• License: mit
• Created: 2024-07-09T08:54:30.000Z (6 months ago)
• Default Branch: main
• Last Pushed: 2024-09-12T15:31:25.000Z (4 months ago)
• Last Synced: 2024-09-14T00:06:15.120Z (4 months ago)
• Topics: biodiversity-indicators, data-cubes, r, r-packages, software-integration, software-streamlining
• Language: R
• Homepage:
• Size: 64.5 KB
• Stars: 0
• Watchers: 0
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Contributing: .github/CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: .github/CODE_OF_CONDUCT.md
  • Citation: CITATION.cff

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# Integrate and streamline indicator software

[Langeraert, Ward![ORCID logo](https://info.orcid.org/wp-content/uploads/2019/11/orcid_16x16.png)](https://orcid.org/0000-0002-5900-8109)[^aut][^cre][^INBO]

[Van Daele, Toon![ORCID logo](https://info.orcid.org/wp-content/uploads/2019/11/orcid_16x16.png)](https://orcid.org/0000-0002-1362-853X)[^aut][^INBO]

Research Institute for Nature and Forest (INBO)[^cph]

European Union's Horizon Europe Research and Innovation Programme (ID No 101059592)[^fnd]

[^cph]: copyright holder

[^fnd]: funder

[^aut]: author

[^cre]: contact person

[^INBO]: Research Institute for Nature and Forest (INBO), Herman Teirlinckgebouw, Havenlaan 88 PO Box 73, B-1000 Brussels, Belgium

**keywords**: R packages; software integration; software streamlining; biodiversity indicators; data cubes

### Description

Scripts to explore the streamlining and integration of software (with focus on R packages) related to the calculation of indicators based on biodiversity data cubes.

This code is developed in context of **T5.5** of the [B-Cubed project](https://b-cubed.eu/).

### Repo structure

```

├── source                                ├ R markdown files

│   └── R                                 ├ R scripts

├── data

│   ├── raw                               ├ store raw data

│   ├── intermediate                      ├ store intermediate data

│   └── processed                         ├ store processed data

├── checklist.yml                         ├ options checklist package (https://github.com/inbo/checklist)

├── organisation.yml                      ├ organisation info (https://inbo.github.io/checklist/articles/organisation.html)

├── inst

│   └── en_gb.dic                         ├ dictionary with words that should not be checked by the checklist package

├── .github                               │ 

│   ├── workflows                         │ 

│   │   └── checklist_project.yml         ├ GitHub repo settings

│   ├── CODE_OF_CONDUCT.md                │ 

│   └── CONTRIBUTING.md                   │

├── integrate-indicator-software.Rproj    ├ R project

├── README.md                             ├ project description

├── LICENSE.md                            ├ licence

├── LICENSE                               │

├── CITATION.cff                          ├ citation info

├── .zenodo.json                          ├ zenodo metadata

└── .gitignore                            ├ files to ignore

```