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https://github.com/baderlab/autoannotateapp

The AutoAnnotate Cytoscape App finds clusters of nodes and visually annotates them with semantic labels and groups.
https://github.com/baderlab/autoannotateapp

cytoscape java

Last synced: about 2 months ago
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The AutoAnnotate Cytoscape App finds clusters of nodes and visually annotates them with semantic labels and groups.

Host: GitHub
URL: https://github.com/baderlab/autoannotateapp
Owner: BaderLab
License: lgpl-2.1
Created: 2015-11-16T15:02:58.000Z (about 9 years ago)
Default Branch: master
Last Pushed: 2024-04-30T23:26:53.000Z (8 months ago)
Last Synced: 2024-05-02T15:23:31.202Z (8 months ago)
Topics: cytoscape, java
Language: Java
Homepage:
Size: 21.8 MB
Stars: 6
Watchers: 4
Forks: 1
Open Issues: 21
Metadata Files:
- Readme: readme.md
- License: LICENSE.md

Awesome Lists containing this project

README

        # AutoAnnotate Cytoscape App

AutoAnnotate is a Cytoscape 3 App that finds clusters in networks and visually annotates them with semantic labels and groups. These visualizations provide a concise visual summary which is helpful for network analysis and interpretation.

 * [AutoAnnotate User Guide](http://baderlab.org/Software/AutoAnnotate/UserManual)

 * [AutoAnnotate on the Cytoscape App Store](http://apps.cytoscape.org/apps/autoannotate)

 * [AutoAnnotate article on F1000](https://f1000research.com/articles/5-1717/v1)

![AA](https://cloud.githubusercontent.com/assets/5350528/19078848/a1a43b06-8a1f-11e6-837e-81e07c3feb8d.png)

[![DOI](https://zenodo.org/badge/22805/BaderLab/AutoAnnotateApp.svg)](https://zenodo.org/badge/latestdoi/22805/BaderLab/AutoAnnotateApp)