https://github.com/barricklab/igem2019

Scripts and datasets for measuring BioBrick plasmid burden.
https://github.com/barricklab/igem2019

Last synced: 4 months ago
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Scripts and datasets for measuring BioBrick plasmid burden.

• Host: GitHub
• URL: https://github.com/barricklab/igem2019
• Owner: barricklab
• Created: 2019-07-16T21:20:32.000Z (about 7 years ago)
• Default Branch: master
• Last Pushed: 2024-07-17T00:12:22.000Z (about 2 years ago)
• Last Synced: 2025-09-09T16:02:58.200Z (11 months ago)
• Language: R
• Homepage:
• Size: 11.2 MB
• Stars: 1
• Watchers: 2
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
# UT Austin iGEM 2019

Home for various scripts and analyses related to the UT Austin 2019 iGEM Burden-O-Meter project and publication.

## Directory: burden_analysis

Experimental data and code for analyzing the burden of BioBrick plasmids from the iGEM Parts Distribution kits.

## Directory: burden_model

Code for simulating the evolutionary failure of a population of cells with a burdensome plasmid.

## Directory: plasmid_sequencing

Code and information for analyzing BioBrick plasmid resequencing data.

## Directory: strain_sequencing

Sequencing data and results for gene expression capacity monitor strains.

## Directory: igem2019_wiki

Earlier versions of this code and data referenced from the [UT Austin 2019 iGEM Wiki](https://2019.igem.org/Team:Austin_UTexas).