https://github.com/bartbruininks/martini_vesicle

A quick and dirty script to generate a Martini Lipids vesicle.
https://github.com/bartbruininks/martini_vesicle

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A quick and dirty script to generate a Martini Lipids vesicle.

• Host: GitHub
• URL: https://github.com/bartbruininks/martini_vesicle
• Owner: BartBruininks
• Created: 2020-05-06T12:01:18.000Z (over 4 years ago)
• Default Branch: master
• Last Pushed: 2020-05-06T12:08:12.000Z (over 4 years ago)
• Last Synced: 2024-11-10T02:47:01.328Z (2 months ago)
• Language: Python
• Size: 1.95 KB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# martini_vesicle

A quick and dirty script to generate a Martini Lipids vesicle.

Example:

vesicle.py 50 800 1000 > 50nm_vesicle.pdb

This will write a PDB containing 800 lipids in the inner leaflet

and 1000 lipids in the outer leaflet. The vesicle will have a 

radius of 50 nm. The specific lipid can be changed by altering

the marked section in the script. In general it looks very much

like insane. By default POPC is used.

Original author: T.A. Wassenaar (2019)

Adapted by: B.M.H. Bruininks (2020)