https://github.com/bebop/ark
Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL
https://github.com/bebop/ark
api blast chembl genbank metabolic-engineering metabolic-network metabolic-pathways metabolomics rest-api rhea uniprot
Last synced: 24 days ago
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Go REST API to replace Genbank, Uniprot, Rhea, and CHEMBL
- Host: GitHub
- URL: https://github.com/bebop/ark
- Owner: bebop
- License: mit
- Created: 2021-05-24T03:55:03.000Z (almost 5 years ago)
- Default Branch: main
- Last Pushed: 2023-12-12T16:56:31.000Z (over 2 years ago)
- Last Synced: 2026-02-17T22:47:31.399Z (about 2 months ago)
- Topics: api, blast, chembl, genbank, metabolic-engineering, metabolic-network, metabolic-pathways, metabolomics, rest-api, rhea, uniprot
- Language: Go
- Homepage:
- Size: 17 MB
- Stars: 23
- Watchers: 5
- Forks: 5
- Open Issues: 14
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Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- Funding: .github/FUNDING.yml
- License: LICENSE
- Code of conduct: CODE_OF_CONDUCT.md
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README
# ark
## ark is a database for engineering organisms
* **Comprehensive:** ark is a single service that can search, store, and cross reference sequences and pathways from genbank, rhea, chembl, and uniprot
* **Modern:** ark serves JSON and is written in Go. ark parses legacy file formats so you don't have to.
* **Stable (soon):** ark will be well tested and designed to be used in industrial, academic, and hobbyist settings
## Install
ark is still in hot development and not production ready. We currently only ship a pre-release dev branch for contributors.
`git clone https://github.com/TimothyStiles/ark && cd ark && go test -v ./...`
## Community
* **[Discord](https://discord.gg/Hc8Ncwt):** Chat about ark and join us for game nights on our discord server!
## Contributing
* **[Code of conduct](CODE_OF_CONDUCT.md):** Please read the full text so you can understand what we're all about and remember to be excellent to each other!
* **[Contributor's guide](CONTRIBUTING.md):** Please read through it before you start hacking away and pushing contributions to this fine codebase.
## Sponsor
* **[Sponsor](https://github.com/sponsors/TimothyStiles):** 🤘 Thanks for your support 🤘
## License
* [MIT](LICENSE)
* Copyright (c) 2022 Timothy Stiles