https://github.com/bentsherman/nextflow-palmetto-demo

Creating and running Nextflow pipelines on Clemson's Palmetto cluster
https://github.com/bentsherman/nextflow-palmetto-demo

nextflow pbspro

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Creating and running Nextflow pipelines on Clemson's Palmetto cluster

• Host: GitHub
• URL: https://github.com/bentsherman/nextflow-palmetto-demo
• Owner: bentsherman
• Created: 2020-03-31T19:26:51.000Z (over 4 years ago)
• Default Branch: master
• Last Pushed: 2021-09-20T21:59:01.000Z (almost 3 years ago)
• Last Synced: 2024-04-06T17:34:24.295Z (5 months ago)
• Topics: nextflow, pbspro
• Language: Python
• Size: 79.1 KB
• Stars: 1
• Watchers: 2
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md

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README

        
# Nextflow-Palmetto Demo

This repository contains a tutorial and example code on how to convert an existing series of job scripts into a Nextflow pipeline and run it on the Palmetto cluster at Clemson University. This tutorial is specific to Palmetto but should generalize to any HPC system with few modifications.

1. [Introduction](01-introduction.md)

2. [Creating a Nextflow Pipeline on Palmetto](02-create.md)

3. [Running a Nextflow Pipeline on Palmetto](03-run.md)