https://github.com/bhklab/survcomp
R package for performance assessment and comparison for survival analysis
https://github.com/bhklab/survcomp
differential-expression gene-expression regression survival visualization
Last synced: 6 months ago
JSON representation
R package for performance assessment and comparison for survival analysis
- Host: GitHub
- URL: https://github.com/bhklab/survcomp
- Owner: bhklab
- Created: 2011-02-02T22:32:03.000Z (over 14 years ago)
- Default Branch: master
- Last Pushed: 2022-03-09T22:26:29.000Z (over 3 years ago)
- Last Synced: 2025-03-27T14:04:18.997Z (6 months ago)
- Topics: differential-expression, gene-expression, regression, survival, visualization
- Language: C++
- Homepage: https://bioconductor.org/packages/release/bioc/html/survcomp.html#since
- Size: 4.71 MB
- Stars: 9
- Watchers: 22
- Forks: 7
- Open Issues: 7
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# survcomp #
Overview
--------
R package providing functions to assess and to compare the performance of risk prediction (survival) models.
Author: *Benjamin Haibe-Kains*, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush
*survcomp* package is also available on [Bioconductor](https://bioconductor.org/packages/release/bioc/html/survcomp.html#since).
Installation
------------
``` r
# Installing the development version from GitHub:
# install.packages("devtools")
devtools::install_github("bhklab/survcomp")
# Installing from Bioconductor
## try http:// if https:// URLs are not supported
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("survcomp")
```
Usage
-----
Extensive usage examples are provided in the survcomp vignette on Bioconductor: [survcomp.pdf](https://bioconductor.org/packages/release/bioc/vignettes/survcomp/inst/doc/survcomp.pdf)
Getting help
------------
To view documentation for the version of this package installed in your system, start R and enter:
``` r
browseVignettes("survcomp")
```
Contact us by filing an issue in the survcomp [issues](https://github.com/bhklab/survcomp/issues) page.