https://github.com/bioconda/bioconda-recipes

Conda recipes for the bioconda channel.
https://github.com/bioconda/bioconda-recipes

bioinformatics conda hacktoberfest package-management

Last synced: 6 days ago
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Conda recipes for the bioconda channel.

• Host: GitHub
• URL: https://github.com/bioconda/bioconda-recipes
• Owner: bioconda
• License: mit
• Created: 2015-09-12T20:33:30.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2024-12-24T23:14:22.000Z (12 days ago)
• Last Synced: 2024-12-24T23:17:01.925Z (12 days ago)
• Topics: bioinformatics, conda, hacktoberfest, package-management
• Language: Shell
• Homepage: https://bioconda.github.io
• Size: 494 MB
• Stars: 1,655
• Watchers: 96
• Forks: 3,305
• Open Issues: 1,093
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE
  • Code of conduct: .github/CODE_OF_CONDUCT.md

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README

        
![](https://raw.githubusercontent.com/bioconda/bioconda-recipes/master/logo/bioconda_monochrome_small.png

 "Bioconda")

# The bioconda channel

[![Gitter](https://badges.gitter.im/bioconda/bioconda-recipes.svg)](https://gitter.im/bioconda/Lobby?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge)

[Conda](http://anaconda.org) is a platform- and language-independent package

manager that supports easy distribution, installation and version management of

software. The [bioconda channel](https://anaconda.org/bioconda) is a Conda

channel providing bioinformatics related packages for **Linux** and **macOS**, 

supporting both x86_64 and aarch64/arm64 architectures.

This repository hosts the corresponding recipes.

## User guide

Please visit https://bioconda.github.io for details. 

## Developer guide

Please visit the new docs at https://bioconda.github.io/contributor/index.html for details.

## Nightly build status

The nightly uploader jobs build any recipes that exist on master but were not successfully uploaded to the [bioconda channel](https://anaconda.org/bioconda). Any failure in the nightly build should be resolved with a PR for the affected recipe.

| arch | build status |

|------|--------------|

| linux-64 | [![Nightly linux-64](https://dev.azure.com/bioconda/bioconda-recipes/_apis/build/status/Nightly%20uploader?branchName=master&jobName=build_and_push_linux&label=Nightly%20linux-64)](https://dev.azure.com/bioconda/bioconda-recipes/_build/latest?definitionId=4) |

| osx-64 | [![Nightly osx-64](https://dev.azure.com/bioconda/bioconda-recipes/_apis/build/status/Nightly%20uploader?branchName=master&jobName=build_and_push_osx&label=Nightly%20osx-64)](https://dev.azure.com/bioconda/bioconda-recipes/_build/latest?definitionId=4) |

| osx-arm64 | [![Nightly osx-arm64](https://github.com/bioconda/bioconda-recipes/actions/workflows/nightly.yml/badge.svg)](https://github.com/bioconda/bioconda-recipes/actions/workflows/nightly.yml) |

| linux-aarch64 |[![CircleCI](https://dl.circleci.com/insights-snapshot/gh/bioconda/bioconda-recipes/master/Nightly%20(ARM)/badge.svg?window=24h)](https://app.circleci.com/insights/github/bioconda/bioconda-recipes/workflows/Nightly%20(ARM)/overview?branch=master&reporting-window=last-24-hours) |