https://github.com/bioconductor/biocparallel

Bioconductor facilities for parallel evaluation
https://github.com/bioconductor/biocparallel

bioconductor-package core-package u24ca289073

Last synced: about 1 year ago
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Bioconductor facilities for parallel evaluation

• Host: GitHub
• URL: https://github.com/bioconductor/biocparallel
• Owner: Bioconductor
• Created: 2012-11-14T20:16:37.000Z (over 13 years ago)
• Default Branch: devel
• Last Pushed: 2025-03-30T14:01:45.000Z (about 1 year ago)
• Last Synced: 2025-03-31T15:25:49.643Z (about 1 year ago)
• Topics: bioconductor-package, core-package, u24ca289073
• Language: R
• Homepage: https://bioconductor.org/packages/BiocParallel
• Size: 1.21 MB
• Stars: 67
• Watchers: 18
• Forks: 30
• Open Issues: 31
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS

Awesome Lists containing this project

README

          
BiocParallel

============

Bioconductor facilities for parallel evaluation (experimental)

Possible TODO

-------------

+ map/reduce-like function

+ bpforeach?

+ Abstract scheduler

+ lazy DoparParam

+ SnowParam support for setSeed, recursive, cleanup

+ subset SnowParam

DONE

----

+ encapsulate arguments as ParallelParam()

+ Standardize signatures

+ Make functions generics

+ parLapply-like function

+ Short vignette

+ elaborate SnowParam for SnowSocketParam, SnowForkParam, SnowMpiParam, ...

+ MulticoreParam on Windows

github notes

------------

+ commit one-liners with names

    git log --pretty=format:"- %h %an: %s"

TO FIX

-------------

+ DoparParam does not pass foreach args 

  (specifically access to .options.nws for chunking)