https://github.com/bioconductor/rsamtools

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
https://github.com/bioconductor/rsamtools

bioconductor-package core-package

Last synced: 3 months ago
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Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

• Host: GitHub
• URL: https://github.com/bioconductor/rsamtools
• Owner: Bioconductor
• License: other
• Created: 2017-09-01T20:24:35.000Z (over 8 years ago)
• Default Branch: devel
• Last Pushed: 2024-08-15T19:52:16.000Z (almost 2 years ago)
• Last Synced: 2024-08-15T21:47:15.213Z (almost 2 years ago)
• Topics: bioconductor-package, core-package
• Language: R
• Homepage: https://bioconductor.org/packages/Rsamtools
• Size: 13.8 MB
• Stars: 26
• Watchers: 15
• Forks: 27
• Open Issues: 14
• Metadata Files:
  • Readme: README.md
  • Changelog: NEWS
  • License: LICENSE

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README

          
[](https://bioconductor.org/)

**Rsamtools** is an R/Bioconductor package that provides an interface to the `samtools`, `bcftools`, and `tabix` utilities for manipulating SAM (Sequence Alignment / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

See https://bioconductor.org/packages/Rsamtools for more information including how to install the release version of the package (please refrain from installing directly from GitHub).