https://github.com/biojulia/cigarstrings.jl

Read and write Concise Idiosyncratic Gapped Alignment Reports.
https://github.com/biojulia/cigarstrings.jl

Last synced: 3 months ago
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Read and write Concise Idiosyncratic Gapped Alignment Reports.

• Host: GitHub
• URL: https://github.com/biojulia/cigarstrings.jl
• Owner: BioJulia
• Created: 2024-08-01T13:55:06.000Z (almost 2 years ago)
• Default Branch: master
• Last Pushed: 2025-01-23T20:25:54.000Z (over 1 year ago)
• Last Synced: 2025-03-22T17:25:20.868Z (about 1 year ago)
• Language: Julia
• Size: 17.6 KB
• Stars: 0
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

          
#  CIGARStrings.jl

[![MIT license](https://img.shields.io/badge/license-MIT-green.svg)](https://github.com/BioJulia/CIGARStrings.jl/blob/master/LICENSE)

[![Documentation](https://img.shields.io/badge/docs-dev-blue.svg)](https://biojulia.github.io/CIGARStrings.jl/dev)

[![](https://codecov.io/gh/BioJulia/BioJuliaTemplate.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/BioJulia/CIGARStrings.jl)

This package provides the `CIGAR` and `BAMCIGAR` types to represent Concise Idiosyncratic Gapped Alignment Reports (CIGARs), popularized in the SAM format.

For more information [read the documentation](https://biojulia.github.io/CIGARStrings.jl/dev)

## Contributing

We appreciate contributions from users including reporting bugs, fixing

issues, improving performance and adding new features.

Take a look at the [contributing files](https://github.com/BioJulia/Contributing)

detailed contributor and maintainer guidelines, and code of conduct.

## Questions?

If you have a question about contributing or using BioJulia software,

come on over and chat to us on [the Julia Slack workspace](https://julialang.org/slack/),

or you can try the [Bio category of the Julia discourse site](https://discourse.julialang.org/c/domain/bio).