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https://github.com/biojulia/gff3.jl
https://github.com/biojulia/gff3.jl
bioinformatics gff3 gff3-files gff3-format
Last synced: 26 days ago
JSON representation
- Host: GitHub
- URL: https://github.com/biojulia/gff3.jl
- Owner: BioJulia
- License: mit
- Created: 2018-10-09T02:33:32.000Z (about 6 years ago)
- Default Branch: develop
- Last Pushed: 2024-04-05T08:49:12.000Z (9 months ago)
- Last Synced: 2024-10-30T01:37:01.587Z (2 months ago)
- Topics: bioinformatics, gff3, gff3-files, gff3-format
- Language: Julia
- Homepage:
- Size: 425 KB
- Stars: 12
- Watchers: 10
- Forks: 5
- Open Issues: 5
-
Metadata Files:
- Readme: README.md
- Funding: .github/FUNDING.yml
- License: LICENSE
Awesome Lists containing this project
README
# GFF3.jl
[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
[![Latest Release](https://img.shields.io/github/release/BioJulia/GFF3.jl.svg)](https://github.com/BioJulia/GFF3.jl/releases/latest)
[![DOI](https://zenodo.org/badge/152175945.svg)](https://zenodo.org/badge/latestdoi/152175945)
[![MIT license](https://img.shields.io/badge/license-MIT-green.svg)](https://github.com/BioJulia/GFF3.jl/blob/master/LICENSE)
[![Stable documentation](https://img.shields.io/badge/docs-stable-blue.svg)](https://biojulia.github.io/GFF3.jl/stable)
[![Latest documentation](https://img.shields.io/badge/docs-dev-blue.svg)](https://biojulia.github.io/GFF3.jl/dev/)> This project follows the [semver](http://semver.org) pro forma and uses the [git-flow branching model](https://nvie.com/posts/a-successful-git-branching-model/ "original blog post").
## Description
The GFF3 package provides I/O and utilities for the GFF3 file format.## Installation
You can install the GFF3 package from the [Julia REPL](https://docs.julialang.org/en/v1/manual/getting-started/).
Press `]` to enter [pkg mode](https://docs.julialang.org/en/v1/stdlib/Pkg/), then enter the following command:
```julia
add GFF3
```If you are interested in the cutting edge of the development, please check out the [develop branch](https://github.com/BioJulia/GFF3.jl/tree/develop) to try new features before release.
## Testing
GFF3 is tested against Julia `1.X` on Linux, OS X, and Windows.**Latest build status:**
[![Unit Tests](https://github.com/BioJulia/GFF3.jl/actions/workflows/UnitTests.yml/badge.svg?branch=master)](https://github.com/BioJulia/GFF3.jl/actions/workflows/UnitTests.yml?query=branch%3Amaster)
[![Documentation](https://github.com/BioJulia/GFF3.jl/actions/workflows/Documentation.yml/badge.svg?branch=master)](https://github.com/BioJulia/GFF3.jl/actions/workflows/Documentation.yml?query=branch%3Amaster)
[![codecov](https://codecov.io/gh/BioJulia/GFF3.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/BioJulia/GFF3.jl)## Contributing
We appreciate [contributions](https://github.com/BioJulia/GFF3.jl/graphs/contributors) from users including reporting bugs, fixing issues, improving performance and adding new features.Take a look at the [contributing files](https://github.com/BioJulia/Contributing) detailed contributor and maintainer guidelines, and code of conduct.
### Financial contributions
We also welcome financial contributions in full transparency on our [open collective](https://opencollective.com/biojulia).
Anyone can file an expense.
If the expense makes sense for the development the core contributors and the person who filed the expense will be reimbursed.## Backers & Sponsors
Thank you to all our backers and sponsors!Love our work and community? [Become a backer](https://opencollective.com/biojulia#backer).
[![backers](https://opencollective.com/biojulia/backers.svg?width=890)](https://opencollective.com/biojulia#backers)
Does your company use BioJulia?
Help keep BioJulia feature rich and healthy by [sponsoring the project](https://opencollective.com/biojulia#sponsor).
Your logo will show up here with a link to your website.[![](https://opencollective.com/biojulia/sponsor/0/avatar.svg)](https://opencollective.com/biojulia/sponsor/0/website)
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[![](https://opencollective.com/biojulia/sponsor/9/avatar.svg)](https://opencollective.com/biojulia/sponsor/9/website)## Questions?
If you have a question about contributing or using BioJulia software, come on over and chat to us on [the Julia Slack workspace](https://julialang.slack.com/channels/biology), or you can try the [Bio category of the Julia discourse site](https://discourse.julialang.org/c/domain/bio).