https://github.com/biojulia/xamauxdata.jl

Read auxiliary data fields in SAM, GFA and PAF formats
https://github.com/biojulia/xamauxdata.jl

Last synced: 3 months ago
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Read auxiliary data fields in SAM, GFA and PAF formats

• Host: GitHub
• URL: https://github.com/biojulia/xamauxdata.jl
• Owner: BioJulia
• License: mit
• Created: 2024-06-16T15:01:43.000Z (almost 2 years ago)
• Default Branch: master
• Last Pushed: 2025-02-25T15:18:56.000Z (over 1 year ago)
• Last Synced: 2025-03-28T22:08:08.163Z (about 1 year ago)
• Language: Julia
• Size: 420 KB
• Stars: 1
• Watchers: 3
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
#  XAMAuxData

[![Latest Release](https://img.shields.io/github/release/BioJulia/XAMAuxData.jl.svg)](https://github.com/BioJulia/XAMAuxData.jl/releases/latest)

[![MIT license](https://img.shields.io/badge/license-MIT-green.svg)](https://github.com/BioJulia/XAMAuxData.jl/blob/master/LICENSE)

[![Documentation](https://img.shields.io/badge/docs-dev-blue.svg)](https://biojulia.github.io/XAMAuxData.jl/dev)

[![](https://codecov.io/gh/BioJulia/XAMAuxData.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/BioJulia/XAMAuxData.jl)

XAMAuxData.jl contains functionality to parse the auxiliary data fields in the BAM and SAM formats.

The formats GFA and PAF share the mini-format of the SAM auxiliary fields, and can therefore share code by using this package.

This pacakge is intended to be used by other packages in the BioJulia ecosystem.

To learn how to use the package, [read the documentation](https://biojulia.github.io/XAMAuxData.jl/stable/)