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https://github.com/bionode/bionode-seq
Module for DNA, RNA and protein sequences manipulation
https://github.com/bionode/bionode-seq
bioinformatics bionode nodejs sequences tool
Last synced: 3 months ago
JSON representation
Module for DNA, RNA and protein sequences manipulation
- Host: GitHub
- URL: https://github.com/bionode/bionode-seq
- Owner: bionode
- License: mit
- Created: 2014-09-02T18:07:11.000Z (over 10 years ago)
- Default Branch: master
- Last Pushed: 2017-08-24T14:43:06.000Z (over 7 years ago)
- Last Synced: 2024-04-13T19:25:40.266Z (10 months ago)
- Topics: bioinformatics, bionode, nodejs, sequences, tool
- Language: JavaScript
- Size: 396 KB
- Stars: 10
- Watchers: 22
- Forks: 4
- Open Issues: 3
-
Metadata Files:
- Readme: README.md
- License: LICENSE
- Code of conduct: CODE_OF_CONDUCT.md
Awesome Lists containing this project
README
# bionode-seq
> Module for DNA, RNA and protein sequences manipulation.
[![NPM version][npm-image]][npm-url]
[![Build Status][travis-image]][travis-url]
[![Coveralls Status][coveralls-image]][coveralls-url]
[![Dependency Status][depstat-image]][depstat-url]
[![Gitter chat][gitter-image]][gitter-url]
Install
-------
Install bionode-seq with [npm](//npmjs.org):
```sh
$ npm install bionode
```
Alternatively, just include `bionode-seq.min.js` via a `` in your page.
Usage
-----
You can require the module in Node.js or in the browser:
```js
var seq = require('bionode-seq')
```
Please read the [documentation](//rawgit.com/bionode/bionode-seq/master/docs/bionode-seq.html) for the methods exposed by bionode-seq.
Contributing
------------
To contribute, clone this repo locally and commit your code on a separate branch.
Please write unit tests for your code, and check that everything works by running the following before opening a pull-request:
```sh
$ npm test
```
Please also check for code coverage:
```sh
$ npm run coverage
```
To rebuild and minify the module for the browser:
```sh
$ npm run build-browser
```
To rebuild the documentation using the comments in the code:
```sh
$ npm run build-docs
```
Check the [issues](http://github.com/bionode/bionode-seq/issues) for ways to contribute.
### Contributors
Please see the file [contributors.md](contributors.md) for a list.
Support
-------
If you find a bug please use the [issues](http://github.com/bionode/bionode-seq/issues) tracker to report it.
If you need help with this particular module, you can use the respective [gitter](http://gitter.im/bionode/bionode-seq) chat room.
For general help or discussion about the bionode project, you can use the IRC channel [#bionode](https://www.irccloud.com/#!/ircs://irc.freenode.net:6697/%23bionode) on Freenode.
Contacts
--------
Bruno Vieira <[[email protected]](mailto:[email protected])> [@bmpvieira](//twitter.com/bmpvieira)
License
-------
bionode-seq is licensed under the [MIT](https://raw.github.com/bionode/bionode-seq/master/LICENSE) license.
Check [ChooseALicense.com](http://choosealicense.com/licenses/mit) for details.
[npm-url]: http://npmjs.org/package/bionode-seq
[npm-image]: http://img.shields.io/npm/v/bionode-seq.svg?style=flat
[travis-url]: http:////travis-ci.org/bionode/bionode-seq
[travis-image]: http://img.shields.io/travis/bionode/bionode-seq.svg?style=flat
[coveralls-url]: http:////coveralls.io/r/bionode/bionode-seq
[coveralls-image]: http://img.shields.io/coveralls/bionode/bionode-seq.svg?style=flat
[depstat-url]: http://david-dm.org/bionode/bionode-seq
[depstat-image]: http://img.shields.io/david/bionode/bionode-seq.svg?style=flat
[gitter-image]: http://img.shields.io/badge/gitter-bionode/bionode--seq-brightgreen.svg?style=flat
[gitter-url]: https://gitter.im/bionode/bionode-seq
