https://github.com/bluebrain/axon-synthesis
A package to synthesize artificial axons
https://github.com/bluebrain/axon-synthesis
axon morphology neuroscience neuroscience-methods
Last synced: 27 days ago
JSON representation
A package to synthesize artificial axons
- Host: GitHub
- URL: https://github.com/bluebrain/axon-synthesis
- Owner: BlueBrain
- License: apache-2.0
- Created: 2024-10-22T09:13:28.000Z (8 months ago)
- Default Branch: main
- Last Pushed: 2024-12-13T14:44:30.000Z (6 months ago)
- Last Synced: 2025-05-04T14:16:43.025Z (about 1 month ago)
- Topics: axon, morphology, neuroscience, neuroscience-methods
- Language: Python
- Homepage: https://axon-synthesis.readthedocs.io/
- Size: 20.4 MB
- Stars: 1
- Watchers: 1
- Forks: 1
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- Contributing: CONTRIBUTING.md
- License: LICENSE.txt
- Citation: CITATION.cff
- Authors: AUTHORS.md
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README

# Axon Synthesis
[](https://github.com/BlueBrain/AxonSynthesis/releases)
[](https://github.com/BlueBrain/axon-synthesis/actions)
[](https://codecov.io/github/BlueBrain/axon-synthesis?branch=main)
[](https://github.com/astral-sh/ruff)
[](https://opensource.org/licenses/Apache-2.0)
[](https://axon-synthesis.readthedocs.io/)
[](https://doi.org/10.1101/2024.10.16.618695)A package to synthesize artificial axons.
The main documentation, is available here: [https://axon-synthesis.readthedocs.io](https://axon-synthesis.readthedocs.io)
### Installation
It is recommended to install ``axon-synthesis`` using [pip](https://pip.pypa.io/en/stable/):
```bash
pip install axon-synthesis
```### Examples
An example can be found in the ``examples`` directory.
This example contains a small input dataset and a ``run.sh`` script that will execute the code.
The inputs can be reviewed and modified for testing.### Citation
When you use the ``axon-synthesis`` software or method for your research, we ask you to cite the
publication associated to this repository (use the ``Cite this repository`` button on the
[main page](https://github.com/BlueBrain/axon-synthesis) of the code).### Funding & Acknowledgment
The development of this software was supported by funding to the Blue Brain Project, a research
center of the École polytechnique fédérale de Lausanne (EPFL), from the Swiss government’s ETH
Board of the Swiss Federal Institutes of Technology.For license and authors, see `LICENSE.txt` and `AUTHORS.md` respectively.
Copyright © 2023-2024 Blue Brain Project, EPFL