https://github.com/bluebrain/morphology-documentation
Morphology Specifications used at BBP
https://github.com/bluebrain/morphology-documentation
ascii hdf5 morphology neurolucida specification
Last synced: 9 months ago
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Morphology Specifications used at BBP
- Host: GitHub
- URL: https://github.com/bluebrain/morphology-documentation
- Owner: BlueBrain
- License: apache-2.0
- Created: 2021-12-10T15:59:54.000Z (over 4 years ago)
- Default Branch: main
- Last Pushed: 2024-02-09T15:12:47.000Z (over 2 years ago)
- Last Synced: 2024-11-13T01:03:05.030Z (over 1 year ago)
- Topics: ascii, hdf5, morphology, neurolucida, specification
- Language: Makefile
- Homepage: https://morphology-documentation.readthedocs.io/
- Size: 237 KB
- Stars: 3
- Watchers: 50
- Forks: 3
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE.txt
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README
> [!WARNING]
> The Blue Brain Project concluded in December 2024, so development has ceased under the BlueBrain GitHub organization.
> Future development will take place at: https://github.com/openbraininstitute/morphology-documentation
# Morphology Documentation
This repository contains the documentation of the morphology files formats used by Blue Brain. The representations divide into two main topological categories:
* tree-like representation (neurons, astrocytes)
* graph-like representation (vasculature)
To update the documentation, update the rst files located in the source directory.
To update the version number, modify the "version" entry in package.json
## Documentation
morphology-documentation is built and hosted on [readthedocs](https://readthedocs.org/).
* [latest snapshot](http://morphology-documentation.readthedocs.org/en/latest/)
To build the documentation locally clone this repository, and run the following command inside it
```tox -e docs```
The documentation is then available under `build/html/index.html`.
Funding & Acknowledgements
-------------------------
The development of this software was supported by funding to the Blue Brain Project, a research center of the École polytechnique fédérale de Lausanne (EPFL), from the Swiss government's ETH Board of the Swiss Federal Institutes of Technology.
Copyright (c) 2022-2024 Blue Brain Project/EPFL