https://github.com/bmeg/grip
Graph Integration Platform
https://github.com/bmeg/grip
badger golang graphdb mongodb
Last synced: 8 months ago
JSON representation
Graph Integration Platform
- Host: GitHub
- URL: https://github.com/bmeg/grip
- Owner: bmeg
- License: mit
- Created: 2017-01-17T20:47:59.000Z (about 9 years ago)
- Default Branch: develop
- Last Pushed: 2025-06-26T22:52:28.000Z (8 months ago)
- Last Synced: 2025-06-26T23:56:48.049Z (8 months ago)
- Topics: badger, golang, graphdb, mongodb
- Language: Go
- Homepage: https://bmeg.github.io/grip
- Size: 14.1 MB
- Stars: 26
- Watchers: 6
- Forks: 8
- Open Issues: 26
-
Metadata Files:
- Readme: README.md
- License: License.txt
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README
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# GRIP
https://bmeg.github.io/grip/
GRIP stands for GRaph Integration Platform. It provides a graph interface on top of a variety of existing database technologies including: MongoDB, PostgreSQL, MySQL, MariaDB, Badger, and LevelDB.
Properties of an GRIP graph:
* Both vertices and edges in a graph can have any number of properties associated with them.
* There are many types of vertices and edges in a graph. Thus two vertices may have myriad types of edges
connecting them reflecting myriad types of relationships.
* Edges in the graph are directed, meaning they have a source and destination.
GRIP also provides a query API for the traversing, analyzing and manipulating your graphs. Its syntax is inspired by
[Apache TinkerPop](http://tinkerpop.apache.org/). Learn more [here](https://bmeg.github.io/grip/).
## Pathway Commons
To load Pathway commons into a local instance of GRIP, first download the Pathway commons source file.
```
curl -O https://www.pathwaycommons.org/archives/PC2/v12/PathwayCommons12.All.BIOPAX.owl.gz
```
Start grip server (using Pebble driver)
```
grip server --driver=pebble
```
In another terminal, create the graph
```
grip create pc12
```
And load the file, using the RDF loader
```
grip rdf --gzip pc12 PathwayCommons12.All.BIOPAX.owl.gz -m "http://www.biopax.org/release/biopax-level3.owl#=" -m "http://pathwaycommons.org/pc12/#=pc12:"
```
Once the graph has been loaded into the database, you can view all of the
different vertex and edge types in the graph:
```
grip list labels pc12
```
Or run an example query, such as count all of the pathways:
```
grip query pc12 'V().hasLabel("Pathway").count()'
```